While most of the Okinawa islands belong to the subtropical climate, technically Yaeyama Islands belong to the tropical rainforest climate which results in the winter temperature being 2-4 Celsius degrees higher than on Okinawa Island and the other islands in the northern part of the Okinawa archipelago. Even in January and February, the average high temperature is 21°C (70°F), making the area a popular winter getaway, although it's often cloudy and windy due to the winter monsoon which makes it a bit too cool for sunbathing. Spring, around March and April, is an excellent time to visit. The rainy season starts early in May and continues until June. Summer in Yaeyama Islands is hot and humid but still one of the peak visiting seasons, while September-October brings a succession of fierce typhoons. November and December are again good times to visit.
The Yaeyama Islands are a long way from anywhere.
The main airport of the islands is Ishigaki. There are frequent connections to Naha as well as limited direct flights to major Japanese cities like Tokyo. And although there is currently no regularly scheduled international service to neighboring Taiwan, there has been an increasing number of charter flights in previous years, and a regular trial service between November 2009 and October 2010 (3 flights a week) will likely continue to be offered again from spring 2011 onward, for 8 to 9 months every year. Interested travelers should check the availability of flights with the TransAsia Airways offices in in Taipei or Tokyo. The establishment of a regular international service is being negotiated at present and would begin at the latest with the opening of the new Ishigaki airport in 2013.
Since Ryukyu Kaiun took the last passenger ferry out of service in 2006 and Arimura Sangyo went out of business altogether in 2007, there are no scheduled services to Taiwan, mainland Japan or islands outside the Yaeyama group.
Between May and October, Star Cruises  offers excursions from Keelung (Taiwan) to Okinawa Island, Miyako Island, and Ishigaki Island. This is not a ferry service, although one could conceivably buy a ticket for one leg from Taiwan to Ishigaki and another one for a return trip some time later (if one doesn't mind the fare, which would be perhaps 10 times that of a typical ferry).
There are frequent services from Ishigaki to Taketomi (just 10 minutes) and Iriomote (40 minutes). Regular boats also connect to the other islands, including the more remote Hateruma, and Yonaguni. The major operators are Anei Kankō and Yaeyama Kankō Ferry.
The Yaeyama Islands are about as off the beaten track as it gets in Japan, but each has its own distinct character. Ishigaki has some spectacular beaches and Iriomote is the only island in all Japan with authentic jungle and mangrove forests, while tiny Taketomi is known for its carefully maintained traditional Ryukyu village.
Thanks to the pristine coral reefs that surround practically all the islands, scuba diving is the number one sports activity. Ishigaki is known for its manta rays, while Yonaguni's star attractions are hammerhead sharks and underwater ruins.
Even with just a snorkel and mask, it's possible to see a good assortment of tropical fish and other marine life among the reefs just a short distance from the beaches. The best spots are probably Nakamoto Beach on Kuro Island and Star Sand Beach on Iriomote.
Yaeyama's best-known dish is the ubiquitous Yaeyama soba (八重山そば), which bears little resemblance to soba on the mainland: the Yaeyaman version consists of white wheat noodles in a mild pork-based stock, garnished with chunks of pork (sōki), some slices of fish cake and red ginger. Available everywhere for ¥400-500 a bowl.
The local beef is also renowned, although needless to say in Japan prime steaks don't come cheap. The tiny island of Kuro, in particular, is known for having more cows than people.
Some of the more exotic local fare on offer includes snake soup and mimigā, a salad of pork ear, cucumber and vinegar.
As elsewhere in Okinawa the tipple of choice is awamori, the best known local brand being Yaesen (八重泉), but Yonaguni is also known for its deadly 60° hanazake. In addition to the ubiquitous Orion beer, Ishigaki also houses a microbrewery.
Yaeyama poses no health risks apart from those found elsewhere in Okinawa. Use plenty of suntan lotion and don't insert your hands into holes in trees that make suspicious hissing sounds.
The Yaeyama islands have over 200 utaki (御嶽), also known as ogan or on, which are holy places for venerating the gods. Akin to low-key versions of Japanese jinja shrines, they usually do not have torii gates, but are instead marked off with low stone walls and Japanese signage. Don't venture inside.
The definitive reference to the islands is Nanzansha's Yaeyama Guide Book (やえやま GUIDE BOOK, ISBN 4876413886, Amazon.co.jp), but alas, the only words of English in this yearly-updated tome are in the title. Still, the maps and thorough listings are invaluable, particularly for the smaller islands. Available in better bookstores throughout Japan for ¥1200, and older copies can almost always be found sitting around in Yaeyaman lodgings.
The free Yaeyama Navi (八重山ナビ) pamphlet with large, detailed maps is also quite good, but the listings inside are limited to paid advertisements.
The ferry companies offer package tours to the islands and information is available at the ferry terminal though most of it is in Japanese.WikiPedia:Yaeyama Islands